pbcore package

Subpackages

• pbcore.chemistry package
  • Submodules
  • pbcore.chemistry.chemistry module
  • Module contents
• pbcore.data
  • pbcore.data
• pbcore.io
  • BAM/cmp.h5 compatibility: quick start
  • bas.h5 / bax.h5 Formats (PacBio basecalls file)
  • BAM format
  • cmp.h5 format (legacy PacBio alignment file)
  • FASTA Format
  • FASTQ Format
  • GFF Format (Version 3)
• pbcore.model
• pbcore.util
  • Process Module
  • ToolRunner Module

Module contents